BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A01LP1|AL425046
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1020 1730 0.0
>3x_Contig1020
Length = 4879
Score = 1730 bits (872), Expect = 0.0
Identities = 879/880 (99%), Gaps = 1/880 (0%)
Strand = Plus / Minus
Query: 1 gatcttaacttctggagaacctctaaaaaccacgtttaaccttctaaaacgaaaagggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 gatcttaacttctggagaacctctaaaaaccacgtttaaccttctaaaacgaaaagggtc 852
Query: 61 cctttagatttatctgaataacgtcacagtacaatatagatgaatattagtaggataaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 cctttagatttatctgaataacgtcacagtacaatatagatgaatattagtaggataaca 792
Query: 121 attacttgttaaaggtatttatttggagagagagcaacaaaactgaatatttatacatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 attacttgttaaaggtatttatttggagagagagcaacaaaactgaatatttatacatcc 732
Query: 181 taacaagataggagtggttggtagacagtttcaaacgttgttatcacttacctatttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 taacaagataggagtggttggtagacagtttcaaacgttgttatcacttacctatttaca 672
Query: 241 tactaattggtaccattttcgccccttcaaagtttcaaaaaaatgtcctgactatgggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tactaattggtaccattttcgccccttcaaagtttcaaaaaaatgtcctgactatgggaa 612
Query: 301 aattgcggggaaccacgtgactcacacgagttattccatttgcggcacacagttgcaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aattgcggggaaccacgtgactcacacgagttattccatttgcggcacacagttgcaact 552
Query: 361 ggtgattccagcatccagacgttaaccgtataactggaggatataggtcctctctcatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggtgattccagcatccagacgttaaccgtataactggaggatataggtcctctctcatgg 492
Query: 421 ctttaatttctcagttttcagttgaatatacatgtatatattacttgaaatggtattatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctttaatttctcagttttcagttgaatatacatgtatatattacttgaaatggtattatg 432
Query: 481 tccaaggttttgtccctcagtttcttttattggaagttcaggtttagatatcaatagttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tccaaggttttgtccctcagtttcttttattggaagttcaggtttagatatcaatagttg 372
Query: 541 gagtgaatgcagtatatgctagttttgatggatgaagtggatatgagcattaacttttaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gagtgaatgcagtatatgctagttttgatggatgaagtggatatgagcattaacttttaa 312
Query: 601 ctttcaaatttcaatcgtcgtcgtcactgacttctatatcacttagttccatactatcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctttcaaatttcaatcgtcgtcgtcactgacttctatatcacttagttccatactatcgt 252
Query: 661 tatcgtcatgtgcttgctcgtcgtctgattcgtccatatccgcatcctcatcctcatcat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tatcgtcatgtgcttgctcgtcgtctgattcgtccatatccgcatcctcatcctcatcat 192
Query: 721 ctgtatcatcggaactgttccatttcccaaactgctgtatgtatttttccttggtagcgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ctgtatcatcggaactgttccatttcccaaactgctgtatgtatttttccttggtagcgt 132
Query: 781 atttgttgatgtattcatgtatcttttgttcatacatatctttatccttcagttgcaacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atttgttgatgtattcatgtatcttttgttcatacatatctttatccttcagttgcaacg 72
Query: 841 ttgctgcttcgttattcaaagggtccga-ccatttggctc 879
|||||||||||||||||||||||||||| |||||||||||
Sbjct: 71 ttgctgcttcgttattcaaagggtccgacccatttggctc 32
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7167
Number of Sequences: 1807
Number of extensions: 7167
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)